BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035D11SP1|AL430051
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1699 1729 0.0
>3x_Contig1699
Length = 18038
Score = 1729 bits (872), Expect = 0.0
Identities = 879/880 (99%), Gaps = 1/880 (0%)
Strand = Plus / Minus
Query: 1 gcacgacaaccactgcatcaccgataaaaaaagagaagaaaacggtaatatatcatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13326 gcacgacaaccactgcatcaccgataaaaaaagagaagaaaacggtaatatatcatagta 13267
Query: 61 gaggagtgaatgcggtagtgtatcaatttcaaaatgactagaaatgacaatgtgatgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13266 gaggagtgaatgcggtagtgtatcaatttcaaaatgactagaaatgacaatgtgatgata 13207
Query: 121 gtatatttattggatggaatgtgagcagtgttgaagagaatacaggaatcaattcatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13206 gtatatttattggatggaatgtgagcagtgttgaagagaatacaggaatcaattcatttt 13147
Query: 181 aaaaacagctccaccgaaaaaaaagatggtgaggtcaaataatcaaaggttgtatctcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13146 aaaaacagctccaccgaaaaaaaagatggtgaggtcaaataatcaaaggttgtatctcat 13087
Query: 241 tgattactgtgaggcacattgaacaccttcagcaccgtggtgtccgtcttcatcatctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13086 tgattactgtgaggcacattgaacaccttcagcaccgtggtgtccgtcttcatcatctga 13027
Query: 301 atcatagctttggcctctgccgttaccaccagctctagcaccatgcttactggagtcgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13026 atcatagctttggcctctgccgttaccaccagctctagcaccatgcttactggagtcgaa 12967
Query: 361 gtctgctaaaacacaatcttcaacttctgcgtccgc-ggaatagaaggtacatttcttgg 419
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 12966 gtctgctaaaacacaatcttcaacttctgcgtccgcaggaatagaaggtacatttcttgg 12907
Query: 420 tggtagaatttcctcgagcttcttcaaggtttcatcgtccgtgaagtgtgcaggtgggaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12906 tggtagaatttcctcgagcttcttcaaggtttcatcgtccgtgaagtgtgcaggtgggaa 12847
Query: 480 cttgatgttgaacttgatcaacaagttaccgtaaccaccgtattttggaattggcatacc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12846 cttgatgttgaacttgatcaacaagttaccgtaaccaccgtattttggaattggcatacc 12787
Query: 540 tttgccttctataactttaacagaacctggagagatcacttcacctggtacgatttcgac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12786 tttgccttctataactttaacagaacctggagagatcacttcacctggtacgatttcgac 12727
Query: 600 cttcaaatattcacctgatacgtgtttgacggcaaattgaccacctgcaatagcagatag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12726 cttcaaatattcacctgatacgtgtttgacggcaaattgaccacctgcaatagcagatag 12667
Query: 660 caaatcgatttcagcgtcgtagtgtaagtcgttaccatctcttttgaagactggatgtgg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12666 caaatcgatttcagcgtcgtagtgtaagtcgttaccatctcttttgaagactggatgtgg 12607
Query: 720 ttgttcagaaacgacaaagacaacgtcacctggaataatacctggagattggtcagcttc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12606 ttgttcagaaacgacaaagacaacgtcacctggaataatacctggagattggtcagcttc 12547
Query: 780 accctggaaaacgattctttggccgtctttcatacctggttcaatgttgacttctaaaac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12546 accctggaaaacgattctttggccgtctttcatacctggttcaatgttgacttctaaaac 12487
Query: 840 ctttctttcgtttacaaccttcttaccgctacagacctta 879
||||||||||||||||||||||||||||||||||||||||
Sbjct: 12486 ctttctttcgtttacaaccttcttaccgctacagacctta 12447
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7408
Number of Sequences: 1807
Number of extensions: 7408
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)